Package: ScottKnottESD 3.0.0

ScottKnottESD: The Non-Parametric Scott-Knott Effect Size Difference (ESD) Test

The Non-Parametric Scott-Knott Effect Size Difference (ESD) test is a mean comparison approach that leverages a hierarchical clustering to partition the set of treatment means (e.g., means of variable importance scores, means of model performance) into statistically distinct groups with non-negligible difference [Tantithamthavorn et al., (2018) <doi:10.1109/TSE.2018.2794977>].

Authors:Chakkrit Tantithamthavorn

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ScottKnottESD/json (API)

# Install 'ScottKnottESD' in R:

install.packages('ScottKnottESD', repos = c('https://klainfo.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/klainfo/scottknottesd/issues

Datasets:

example - An example dataset of Breiman's variable importance scores
maven - An example dataset of Breiman's variable importance scores

On CRAN:

defect-prediction-models effect-size multiple-comparisons ranking-algorithm scott-knott statistical-tests

5.76 score 42 stars 68 scripts 246 downloads 5 exports 77 dependencies

Last updated 2 years agofrom:401664099a. Checks:OK: 1 WARNING: 6. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 19 2024
R-4.5-win	WARNING	Nov 19 2024
R-4.5-linux	WARNING	Nov 19 2024
R-4.4-win	WARNING	Nov 19 2024
R-4.4-mac	WARNING	Nov 19 2024
R-4.3-win	WARNING	Nov 19 2024
R-4.3-mac	WARNING	Nov 19 2024

Exports:check.ANOVA.assumptions checkDifference long2wide normalize sk_esd

Dependencies:abind backports boot broom car carData cli colorspace cowplot cpp11 curl Deriv doBy dplyr effsize fansi farver forecast Formula fracdiff generics ggplot2 glue gtable isoband jsonlite labeling lattice lifecycle lme4 lmtest magrittr MASS Matrix MatrixModels mgcv microbenchmark minqa modelr munsell nlme nloptr nnet numDeriv pbkrtest pillar pkgconfig plyr purrr quadprog quantmod quantreg R6 RColorBrewer Rcpp RcppArmadillo RcppEigen reshape2 rlang scales SparseM stringi stringr survival tibble tidyr tidyselect timeDate tseries TTR urca utf8 vctrs viridisLite withr xts zoo

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
The Scott-Knott Effect Size Difference (ESD) Test	ScottKnottESD-package ScottKnottESD
Check basic ANOVA assumptions	"check.ANOVA.assumptions" check.ANOVA.assumptions
Convert data from long format to wide format	"long2wide" long2wide
Normalize non-normal distributions using the Box-Cox Power Transformation	"normalize" normalize
An example dataset of Breiman's variable importance scores	example
An example dataset of Breiman's variable importance scores	maven
Print sk_esd objects	print.sk_esd
A function to check the magnitude of the difference for all pairs of treatments	checkDifference SK.ESD sk_esd